Files

• dir src Root of the source tree.
  • dir Base Basic, general, generic utilities, reused across all executables.
    • file Benchmark.hpp Macro definitions for fine-grained benchmarking.
    • file Callback.hpp Tagged tuple types used for passing Charm++ callbacks.
    • file Compiler.hpp Compiler definitions.
    • file ContainerUtil.hpp Various STL container utilities.
    • file Data.hpp Generic data storage with different memory layouts.
    • file Exception.cpp Exception class definition.
    • file Exception.hpp Exception class declaration.
    • file Fields.hpp Fields used to store data associated to mesh entities.
    • file Flip_map.hpp Flip a std::map yielding a multimap sorted by std::map::value_type.
    • file Has.hpp "Has-a" utilities for detecting class internals
    • file If.hpp Compile-time type selection.
    • file LoadDistributor.cpp Load distributors.
    • file LoadDistributor.hpp Load distributors and partitioning data types.
    • file Print.hpp General purpose pretty printer functionality.
    • file PrintTaggedTuple.hpp Simple (unformatted, one-line) TaggedTuple printer.
    • file PrintTaggedTupleDeep.hpp Structured TaggedTuple printer with depth/indentation.
    • file PrintUtil.hpp String conversion utilities.
    • file ProcessException.cpp Process an exception.
    • file ProcessException.hpp Process an exception definition.
    • file Progress.hpp Simple progress indicator.
    • file PUPUtil.hpp Charm++ Pack/UnPack utilities.
    • file Reader.cpp Reader class definition.
    • file Reader.hpp Reader base class declaration.
    • file Table.hpp Basic functionality for storing and sampling a discrete (y1,y2,...,yN) = f(x) function.
    • file TaggedTuple.hpp Tagged tuple allowing tag-based access.
    • file Timer.cpp Timer definition.
    • file Timer.hpp Timer declaration.
    • file Types.hpp Toolkit-level type definitions.
    • file Vector.hpp Vector algebra.
    • file Writer.cpp Writer base class definition.
    • file Writer.hpp Writer base class declaration.
  • dir Control Command line and input file parsing and grammars for all executables.
    • file InciterConfig.cpp Lua parser for Inciter's control file.
    • file InciterConfig.hpp Inciter confguration (parsed from cmdline and control file)
    • file Lua.c Implementation of minilua.
    • file LuaParser.hpp Lua parser header.
    • file MeshConvConfig.hpp MeshConv's command line.
    • file StatCtr.hpp Types and associated functions to deal with moments and PDFs.
    • file UnitTestConfig.hpp UnitTest's command line.
  • dir Inciter Functionality specific to Inciter
    • dir AMR Adaptive mesh refinement for Inciter
      • file Error.cpp Class for computing error estimates for mesh refinement.
      • file Error.hpp Class for computing error estimates for mesh refinement.
    • file ChoCG.cpp ChoCG: Projection-based solver for incompressible flow.
    • file ChoCG.hpp ChoCG: Projection-based solver for incompressible flow.
    • file Diagnostics.hpp Common data for collecting diagnostics.
    • file DiagReducer.cpp Custom Charm++ reducer for merging diagnostics across PEs.
    • file DiagReducer.hpp Custom Charm++ reducer for merging diagnostics across PEs.
    • file Discretization.cpp
    • file Discretization.hpp
    • file GraphReducer.cpp Custom Charm++ reducer for merging mesh graphs across PEs.
    • file GraphReducer.hpp Custom Charm++ reducer for merging mesh graphs across PEs.
    • file History.hpp Types for collecting history output.
    • file IntegralReducer.cpp Custom Charm++ reducer for merging integrals across PEs.
    • file IntegralReducer.hpp Custom Charm++ reducer for merging integrals across PEs.
    • file Integrals.hpp Common data for collecting integrals.
    • file KozCG.cpp KozCG: Taylor-Galerkin, FCT, element-based continuous Galerkin.
    • file KozCG.hpp KozCG: Taylor-Galerkin, FCT, element-based continuous Galerkin.
    • file LaxCG.cpp LaxCG: Time-derivative preconditioning for all Ma.
    • file LaxCG.hpp LaxCG: Time-derivative preconditinoing for all Ma.
    • file LohCG.cpp LohCG: Artificial compressibility solver for incompressible flow.
    • file LohCG.hpp LohCG: Artificial compressibility solver for incompressible flow.
    • file NodeDiagnostics.cpp NodeDiagnostics class for collecting nodal diagnostics.
    • file NodeDiagnostics.hpp NodeDiagnostics class for collecting diagnostics.
    • file Partitioner.cpp Charm++ chare partitioner nodegroup used to perform mesh partitioning.
    • file Partitioner.hpp Charm++ chare partitioner nodegroup used to perform mesh partitioning.
    • file PartsReducer.cpp Custom Charm++ reducer for merging mesh part assignments across PEs.
    • file PartsReducer.hpp Custom Charm++ reducer for merging mesh part assignments across PEs.
    • file PUPAMR.cpp Charm++ Pack/UnPack utilities for AMR.
    • file PUPAMR.hpp Charm++ Pack/UnPack utilities for AMR.
    • file Refiner.cpp Mesh refiner for interfacing the mesh refinement library.
    • file Refiner.hpp Mesh refiner for interfacing the mesh refinement library.
    • file RieCG.cpp RieCG: Riemann, MUSCL, Runge-Kutta, edge-based continuous Galerkin.
    • file RieCG.hpp RieCG: Riemann, MUSCL, Runge-Kutta, edge-based continuous Galerkin.
    • file Sorter.cpp Mesh sorter for global distributed mesh reordering.
    • file Sorter.hpp Mesh sorter for global distributed mesh reordering.
    • file Transporter.cpp Transporter drives the time integration of transport equations.
    • file Transporter.hpp Transporter drives the time integration of transport equations.
    • file ZalCG.cpp ZalCG: Taylor-Galerkin, FCT, edge-based continuous Galerkin.
    • file ZalCG.hpp ZalCG: Taylor-Galerkin, FCT, edge-based continuous Galerkin.
  • dir IO File input and output.
    • file ASCMeshReader.cpp ASC mesh reader class definition.
    • file ASCMeshReader.hpp ASC mesh reader class declaration.
    • file DiagWriter.cpp Text diagnostics writer declaration.
    • file DiagWriter.hpp Text diagnostics writer definition.
    • file ExodusIIMeshReader.cpp ExodusII mesh reader.
    • file ExodusIIMeshReader.hpp ExodusII mesh reader.
    • file ExodusIIMeshWriter.cpp ExodusII mesh-based data writer.
    • file ExodusIIMeshWriter.hpp ExodusII mesh-based data writer.
    • file GmshMeshIO.hpp Gmsh mesh reader and writer related types.
    • file GmshMeshReader.cpp Gmsh mesh reader class definition.
    • file GmshMeshReader.hpp Gmsh mesh reader class declaration.
    • file GmshMeshWriter.cpp Gmsh mesh writer class definition.
    • file GmshMeshWriter.hpp Gmsh mesh writer class declaration.
    • file MeditMeshReader.cpp Medit mesh reader class definition.
    • file MeditMeshReader.hpp Medit mesh reader class declaration.
    • file MeshDetect.cpp Unstructured mesh file format detection.
    • file MeshDetect.hpp Unstructured mesh file format detection.
    • file MeshFactory.cpp Unstructured mesh reader and writer factory.
    • file MeshFactory.hpp Unstructured mesh reader and writer factory.
    • file MeshWriter.cpp Charm++ group for outputing mesh data to file.
    • file MeshWriter.hpp Charm++ group for outputing mesh data to file.
    • file NetgenMeshReader.cpp Netgen mesh reader class definition.
    • file NetgenMeshReader.hpp Netgen mesh reader class declaration.
    • file NetgenMeshWriter.cpp Netgen mesh writer class definition.
    • file NetgenMeshWriter.hpp Netgen mesh writer class declaration.
    • file PDFWriter.cpp Univariate PDF writer.
    • file PDFWriter.hpp PDF writer class declaration.
    • file RDGFLOMeshReader.cpp RDGFLO mesh reader class declaration.
    • file RDGFLOMeshReader.hpp RDGFLO mesh reader class declaration.
    • file UGRIDMeshReader.cpp UGRID mesh reader class declaration.
    • file UGRIDMeshReader.hpp UGRID mesh reader class declaration.
  • dir Main Driver routines for all executables.
    • file Inciter.cpp Inciter, computational shock hydrodynamics tool, Charm++ main chare.
    • file Init.cpp Common initialization routines for main() functions for multiple exectuables.
    • file Init.hpp Common initialization routines for main() functions for multiple exectuables.
    • file LBSwitch.cpp Charm++ chare group for switching on/off load balancing.
    • file LBSwitch.hpp Charm++ chare group for switching on/off load balancing.
    • file MeshConv.cpp Mesh file converter Charm++ main chare.
    • file MeshConvDriver.cpp Mesh converter driver.
    • file MeshConvDriver.hpp Mesh converter driver.
    • file UnitTest.cpp UnitTest's Charm++ main chare and main().
  • dir Mesh Functionality related to unstructured meshes and derived data structures.
    • file Around.hpp Helper class for iterating through linked lists of derived data.
    • file Centering.hpp Mesh solution location (centering)
    • file DerivedData.cpp Generate data structures derived from unstructured mesh.
    • file DerivedData.hpp Generate data structures derived from unstructured mesh.
    • file Gradients.cpp Functions computing gradients on unstructured meshes for tetrahedra.
    • file Gradients.hpp Functions computing gradients on unstructured meshes for tetrahedra.
    • file Reorder.cpp Mesh reordering routines for unstructured meshes.
    • file Reorder.hpp Mesh reordering routines for unstructured meshes.
    • file UnsMesh.hpp 3D unstructured mesh class declaration
  • dir NoWarning Include files turning on/off specific compiler warnings for third-party library includes.
    • file any.hpp Include brigand/algorithms/any.hpp with turning off specific compiler warnings.
    • file cgreceiver.decl.h Include cgreceiver.decl.h with turning off specific compiler warnings.
    • file cgreceiver.def.h Include cgreceiver.def.h with turning off specific compiler warnings.
    • file charm++.hpp Include charm++.h with turning off specific compiler warnings.
    • file charm.hpp Include charm.h with turning off specific compiler warnings.
    • file charmtimer.def.h Include charmtimer.def.h with turning off specific compiler warnings.
    • file chocg.decl.h Include chocg.decl.h with turning off specific compiler warnings.
    • file chocg.def.h Include chocg.def.h with turning off specific compiler warnings.
    • file collector.def.h Include collector.def.h with turning off specific compiler warnings.
    • file conjugategradients.decl.h Include conjugategradients.decl.h with turning off specific compiler warnings.
    • file conjugategradients.def.h Include conjugategradients.def.h with turning off specific compiler warnings.
    • file discretization.decl.h Include discretization.decl.h with turning off specific compiler warnings.
    • file discretization.def.h Include discretization.def.h with turning off specific compiler warnings.
    • file exodusII.hpp Include exodusII.h with turning off specific compiler warnings.
    • file inciter.decl.h Include inciter.decl.h with turning off specific compiler warnings.
    • file inciter.def.h Include inciter.def.h with turning off specific compiler warnings.
    • file index_of.hpp Include brigand/algorithms/index_of.hpp with turning off specific compiler warnings.
    • file kozcg.decl.h Include kozcg.decl.h with turning off specific compiler warnings.
    • file kozcg.def.h Include kozcg.def.h with turning off specific compiler warnings.
    • file laxcg.decl.h Include laxcg.decl.h with turning off specific compiler warnings.
    • file laxcg.def.h Include laxcg.def.h with turning off specific compiler warnings.
    • file lbswitch.decl.h Include lbswitch.decl.h with turning off specific compiler warnings.
    • file lbswitch.def.h Include lbswitch.def.h with turning off specific compiler warnings.
    • file lohcg.decl.h Include lohcg.decl.h with turning off specific compiler warnings.
    • file lohcg.def.h Include lohcg.def.h with turning off specific compiler warnings.
    • file meshconv.decl.h Include meshconv.decl.h with turning off specific compiler warnings.
    • file meshconv.def.h Include meshconv.def.h with turning off specific compiler warnings.
    • file meshwriter.decl.h Include meshwriter.decl.h with turning off specific compiler warnings.
    • file meshwriter.def.h Include meshwriter.def.h with turning off specific compiler warnings.
    • file migrated.def.h Include migrated_base.def.h with turning off specific compiler warnings.
    • file mpi.hpp Include mpi.h with turning off specific compiler warnings.
    • file partition.hpp Include brigand/algorithms/partition.hpp with turning off specific compiler warnings.
    • file partitioner.decl.h Include partitioner.decl.h with turning off specific compiler warnings.
    • file partitioner.def.h Include partitioner.def.h with turning off specific compiler warnings.
    • file pup.hpp Include pup.h with turning off specific compiler warnings.
    • file pup_stl.hpp Include pup_stl.h with turning off specific compiler warnings.
    • file quietcerr.decl.h Include quietcerr.decl.h with turning off specific compiler warnings.
    • file quietcerr.def.h Include quietcerr.def.h with turning off specific compiler warnings.
    • file refiner.decl.h Include refiner.decl.h with turning off specific compiler warnings.
    • file refiner.def.h Include refiner.def.h with turning off specific compiler warnings.
    • file riecg.decl.h Include riecg.decl.h with turning off specific compiler warnings.
    • file riecg.def.h Include riecg.def.h with turning off specific compiler warnings.
    • file set.hpp Include brigand/sequences/set.hpp with turning off specific compiler warnings.
    • file sip_hash.hpp Include highwayhash/sip_hash.hpp with turning off specific compiler warnings.
    • file sorter.decl.h Include sorter.decl.h with turning off specific compiler warnings.
    • file sorter.def.h Include sorter.def.h with turning off specific compiler warnings.
    • file transporter.decl.h Include transporter.decl.h with turning off specific compiler warnings.
    • file transporter.def.h Include transporter.def.h with turning off specific compiler warnings.
    • file tut.hpp Include tut/tut.hpp with turning off specific compiler warnings.
    • file tut_result.hpp Include tut/tut_result.hpp with turning off specific compiler warnings.
    • file tut_runner.hpp Include tut/tut_runner.hpp with turning off specific compiler warnings.
    • file tutsuite.decl.h Include tutsuite.decl.h with turning off specific compiler warnings.
    • file tutsuite.def.h Include tutsuite.def.h with turning off specific compiler warnings.
    • file tuttest.decl.h Include tuttest.decl.h with turning off specific compiler warnings.
    • file tuttest.def.h Include tuttest.def.h with turning off specific compiler warnings.
    • file unittest.decl.h Include unittest.decl.h with turning off specific compiler warnings.
    • file unittest.def.h Include unittest.def.h with turning off specific compiler warnings.
    • file zalcg.decl.h Include zalcg.decl.h with turning off specific compiler warnings.
    • file zalcg.def.h Include zalcg.def.h with turning off specific compiler warnings.
  • dir Partition Code interoperating with static mesh partitioners.
    • file ZoltanGeom.cpp Interoperation with the Zoltan library's geometric partitioners.
    • file ZoltanGeom.hpp Interoperation with the Zoltan library's geometric partitioners.
    • file ZoltanGraph.cpp Interoperation with the Zoltan library's graph partitioners.
    • file ZoltanGraph.hpp Interoperation with the Zoltan library's graph partitioners.
  • dir Physics Functions implementing physics: operators, boundary conditions, test problem-specific functionality, etc.
    • file BC.cpp Boundary conditions.
    • file BC.hpp Boundary conditions.
    • file Box.cpp Initial conditions box related functionality.
    • file Box.hpp Initial condition box related functionality.
    • file Chorin.cpp ChoCG: Projection-based solver for incompressible flow.
    • file Chorin.hpp ChoCG: Projection-based solver for incompressible flow.
    • file EOS.hpp Equation of state functions.
    • file Kozak.cpp KozCG: Taylor-Galerkin, FCT, element-based continuous Galerkin.
    • file Kozak.hpp KozCG: Taylor-Galerkin, FCT, element-based continuous Galerkin.
    • file Lax.cpp LaxCG: Time-derivative preconditioning for all Ma.
    • file Lax.hpp LaxCG: Time-derivative preconditioning for all Ma.
    • file Lohner.cpp LohCG: Artificial compressibility solver for incompressible flow.
    • file Lohner.hpp LohCG: Artificial compressibility solver for incompressible flow.
    • file Problems.cpp Problem-specific functions. Initial conditions, source terms.
    • file Problems.hpp Problem-specific functions. Initial conditions, source terms.
    • file Riemann.cpp Riemann, MUSCL, limiting for edge-based continuous Galerkin.
    • file Riemann.hpp Riemann, MUSCL, limiting for edge-based continuous Galerkin.
    • file Zalesak.cpp Zalesak, FCT limiting for edge-based continuous Galerkin.
    • file Zalesak.hpp Zalesak, FCT limiting for edge-based continuous Galerkin.
  • dir Statistics Estimating statistical moments and probablity distributions from ensembles.
    • file PDFReducer.cpp Custom Charm++ reducer for merging PDFs across PEs.
    • file PDFReducer.hpp Custom Charm++ reducer for merging PDFs across PEs.
    • file UniPDF.hpp Univariate PDF estimator.
  • dir UnitTest Functionality specific to UnitTest
    • file QuietCerr.cpp Charm++ nodegroup to quiet std::cerr in a thread-safe fashion.
    • file QuietCerr.hpp Charm++ nodegroup to quiet std::cerr in a thread-safe fashion.
    • file TUTConfig.hpp Template Unit Test unit test configuration for all tests.
    • file TUTSuite.cpp Template Unit Test suite class definition.
    • file TUTSuite.hpp Template Unit Test suite class declaration.
    • file TUTTest.cpp Template Unit Test unit test class definition.
    • file TUTTest.hpp Template Unit Test unit test class declaration.
    • file TUTUtil.hpp Utilities for unit testing with the Template Unit Test library.